This hackathon will take place from Monday 9th Dec - Wednesday 11th Dec 2024. The timing of this event will be Central European Time (CET). The event precedes the European Society for Spatial Biology’s inaugural conference on 12-13 Dec.

>> Join via Teams <<

Day 1: Monday 9th December 2024 [Times in CET]

09:30-10:00 Arrival and coffee - Esther Lederberg conference room, floor 2 room 328
10:00-10:30 Welcome and introduction SpaceHack | drawing drawing | Naveed Ishaque, Berin Institute of Health
10:30-11:00 SpaceHack Cloud and GitHub | drawing drawing | Sven Twardziok and Naveed Ishaque, Berin Institute of Health
11:00-11:15 Cell segmentation from commercial platforms - the past, present & future | drawing drawing | Thomas Conrad, Team lead for single-cell and spatial genomics, Berin Institute of Health drawing drawing | *speaker TBC*
11:15-11:30 Sponsor talk 1 - tech, data, project pitch | drawing drawing | *Speaker, Affiliation*
11:30-11:45 Sponsor talk 2 - tech, data, project pitch | drawing drawing | *Speaker, Affiliation*
11:45-12:00 Sponsor talk 3 - tech, data, project pitch | drawing drawing | *Speaker, Affiliation*
12:00-13:00 **Lunch**
13:00-13:30 Stand up and pitch your projects
13:30-14:30 Match making - join project teams and start hacking
14:30-15:00 Coffee/tea break
15:00-17:15 Hacking!
17:15-17:30 Uniformity of gene expression over tissues | drawing drawing | *Brian Long, Allen Inst for Brain Science*
17:30-18:00 USA alignment - quick overview of GitHub, Cloud, and projects
18:00-18:15 Talk - The European Society for Spatial Biology | drawing drawing | *Denis Schapiro, Heidelberg University Hospital*
18:15-19:00 *Free time* or straight to the evening event
19:00-20:00 sponsored evening event activity, Berlin Computergames Museum (travel to U-Weberwiese)
20:00-22:00 sponsored dinner activity, TBC

Day 2: Tuesday 10th December 2024

09:00-09:30 Alignment with Australia + project recap
09:30-10:00 The EBI BioImage Archive for Spatial Transcriptomics | drawing drawing | Teresa Zulueta-Coarasa, EBI BioImage Archive
10:00-12:00 Hacking (inc coffee break)
12:00-13:00 Lunch
13:00-13:15 Group photo
13:15-15:30 Hacking
15:30-16:00 Break
16:00-17:30 Hacking
17:30-18:00 Alignment with USA
18:00-20:00 Optional evening activity: Medieval Christmas Market at the RAW

Day 3: Wednesday 11th December 2024

09:00-09:30 Alignment with Australia + project recap
09:30-12:00 Hacking (inc coffee break)
12:00-13:00 Lunch
13:00-15:00 Project wrap up, presentation preparation, BioHackRxiv-ing
15:00-15:30 Break
15:30-17:00 Presentation from team leads | drawing drawing
17:00-18:00 Alignment with USA